In-Vitro Bromodeoxyuridine BrdU Assay

Biology | Toxicology | Biochemistry | Pharmacology

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General Aim

The BrdU assay experiment aims at visualizing the Bromodeoxyuridine (BrdU assay) incorporation as a thymidine analogue into nuclear DNA in order to detect DNA synthesis in vitro using antibody probes and a fluorescent microscope.

Method

In Vitro Immunofluorescence Assay for detection of incorporated BrdU during DNA replication using BrdU cell proliferation assay.

Learning Objectives (ILOs)

  • Successfully handle the required instruments and consumables needed in the brdu assay experiment according to brdu assay protocol.

  • Check the confluence and count cells under the microscope through the Brdu test.
  • Dilute the cells to a specific count suitable for seeding in the 96-well plate.
  • Calculate the concentration of tested chemicals and prepare the calculated doses in the cell culture medium.
  • Aspirate the old medium and add the new medium containing the tested chemicals in the appropriate wells.
  • Add the BrdU assay substrate solution to cells and read the results using the fluorescent microscope after incubation of cells with first anti BrdU antibody and secondary antibodies.

Theoretical Background / Context

  • In genetics, genotoxicity testing describes the property of chemical agents that damages the genetic information within a cell causing mutations, which may lead to cancer. 
  • While genotoxicity is often confused with mutagenicity, all mutagens are genotoxic, whereas not all genotoxic substances are mutagenic. 
  • The alteration can have direct or indirect effects on the DNA: the induction of mutations mistimed event activation, and direct DNA damage leading to mutations. 
  • The permanent, heritable changes can affect either somatic cells of the organism or germ cells to be passed on to future generations. 
  • Cells prevent the expression of the genotoxic mutation by either DNA repair or apoptosis; however, the damage may not always be fixed leading to mutagenesis.

Brdu Assay Principle of Work

  • 5-Bromo- 2’ -deoxyuridine (Bromodeoxyuridine (BrdU)) is a thymidine analogue that differs from thymidine in its substitution of bromine for a methyl group. 
  • BrdU competes with thymidine for incorporation into nuclear DNA during the S-phase of the cell cycle. 
  • Therefore, BrdU serves as a marker of DNA synthesis in the BrdU proliferation assay, and separate means such as counting mitotic figures may be employed to ensure accuracy with regard to cell division.

                           

  • After BrdU assay is incorporated into nuclear DNA, samples are fixed and incubated with anti-BrdU monoclonal antibodies and nucleases (or they are exposed to heat or other conditions which cause DNA denaturation) according to the BrdU cell proliferation assay principle.
  • This denaturation is necessary to allow anti-BrdU monoclonal antibodies to gain access to the incorporated BrdU in single-stranded DNA. 
  • The sample is subsequently incubated with a fluorescent secondary antibody against the anti-BrdU antibody and visualized by a fluorescence microscope.

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